BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C03LP1|AL428687
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1366 1746 0.0
>3x_Contig1366
Length = 7981
Score = 1746 bits (881), Expect = 0.0
Identities = 881/881 (100%)
Strand = Plus / Plus
Query: 1 atcccaagctacatcattttcattagcatcatctggtaatttattgagtctattgtacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5282 atcccaagctacatcattttcattagcatcatctggtaatttattgagtctattgtacac 5341
Query: 61 tatccttctggcttgaatggtttcaaatatagaaatatagcacaacaagggtgagtatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5342 tatccttctggcttgaatggtttcaaatatagaaatatagcacaacaagggtgagtatat 5401
Query: 121 cagcgtcatcacaaagctggatagatacttaccttgtgtttttggtagcatccagattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5402 cagcgtcatcacaaagctggatagatacttaccttgtgtttttggtagcatccagattat 5461
Query: 181 aggagtaatacaaatctctatcaaattcaaaggtggaacatagacatcttcgtctggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5462 aggagtaatacaaatctctatcaaattcaaaggtggaacatagacatcttcgtctggagc 5521
Query: 241 tctgatgtatcttaaggtcttttgagccatcaatgctaaatattcatctgtgacattatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5522 tctgatgtatcttaaggtcttttgagccatcaatgctaaatattcatctgtgacattatc 5581
Query: 301 aattactttttgatatgcactcgagtacaacgcaatcaatatattcaagagaattatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5582 aattactttttgatatgcactcgagtacaacgcaatcaatatattcaagagaattatagt 5641
Query: 361 gacaatgaaacagtaactgtaatataggatagctgcataaggaggggcaaacctttcgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5642 gacaatgaaacagtaactgtaatataggatagctgcataaggaggggcaaacctttcgaa 5701
Query: 421 catatcaaacccaccatcgcccaaaatagtagtgaagaggtttgataatattggccatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5702 catatcaaacccaccatcgcccaaaatagtagtgaagaggtttgataatattggccatgt 5761
Query: 481 aatctcgcgccttccatctgccgaatctagtcctaggaacccctgtaaaaatccaatcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5762 aatctcgcgccttccatctgccgaatctagtcctaggaacccctgtaaaaatccaatcat 5821
Query: 541 tatcaaaattaataaagagaagaagtaaatggactcccgcatcatatgtgccaataccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5822 tatcaaaattaataaagagaagaagtaaatggactcccgcatcatatgtgccaataccac 5881
Query: 601 caataacgcaccaacaaatctttcagattccaaatatagtaacaaacgagaccataccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5882 caataacgcaccaacaaatctttcagattccaaatatagtaacaaacgagaccataccaa 5941
Query: 661 tggcgctgcacatgctaaaattctatacgaaacaatatcccagtgctctgatggtaaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5942 tggcgctgcacatgctaaaattctatacgaaacaatatcccagtgctctgatggtaaatc 6001
Query: 721 agccttccatgggcacacactaatgatacgaataacgatagaacatatgataattgaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6002 agccttccatgggcacacactaatgatacgaataacgatagaacatatgataattgaaaa 6061
Query: 781 cataaaatcatgatatacgttccaaaaaccaatgtacgcccatccaacatgataacactt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6062 cataaaatcatgatatacgttccaaaaaccaatgtacgcccatccaacatgataacactt 6121
Query: 841 gactaattcgtcgagtgcatgacccagtgtgaacacataaa 881
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 6122 gactaattcgtcgagtgcatgacccagtgtgaacacataaa 6162
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6914
Number of Sequences: 1807
Number of extensions: 6914
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)